Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.48■□□□□ 0.23
PLOD3O60568 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PLOD3O60568 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PLOD3O60568 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PLOD3O60568 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PLOD3O60568 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.47■□□□□ 0.23
PLOD3O60568 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
PLOD3O60568 KRT17P6-201ENST00000453795 1220 ntBASIC16.47■□□□□ 0.23
PLOD3O60568 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.47■□□□□ 0.23
PLOD3O60568 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.47■□□□□ 0.23
PLOD3O60568 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.47■□□□□ 0.23
PLOD3O60568 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
PLOD3O60568 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.47■□□□□ 0.23
PLOD3O60568 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.47■□□□□ 0.23
PLOD3O60568 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.47■□□□□ 0.23
PLOD3O60568 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.47■□□□□ 0.23
PLOD3O60568 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
PLOD3O60568 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PLOD3O60568 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.47■□□□□ 0.23
PLOD3O60568 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PLOD3O60568 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
PLOD3O60568 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PLOD3O60568 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.46■□□□□ 0.23
PLOD3O60568 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.46■□□□□ 0.23
PLOD3O60568 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PLOD3O60568 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 IGHV3-47-201ENST00000425060 335 ntBASIC16.46■□□□□ 0.23
PLOD3O60568 AC103564.2-201ENST00000432853 1299 ntBASIC16.46■□□□□ 0.23
PLOD3O60568 LINC00265-3P-201ENST00000447588 903 ntBASIC16.46■□□□□ 0.23
PLOD3O60568 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PLOD3O60568 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.46■□□□□ 0.23
PLOD3O60568 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.46■□□□□ 0.23
PLOD3O60568 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.46■□□□□ 0.23
PLOD3O60568 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.46■□□□□ 0.23
PLOD3O60568 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
PLOD3O60568 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PLOD3O60568 AC011467.2-201ENST00000598425 242 ntBASIC16.46■□□□□ 0.23
PLOD3O60568 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.46■□□□□ 0.23
PLOD3O60568 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
PLOD3O60568 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.46■□□□□ 0.23
PLOD3O60568 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PLOD3O60568 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PLOD3O60568 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PLOD3O60568 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.45■□□□□ 0.22
PLOD3O60568 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.45■□□□□ 0.22
PLOD3O60568 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PLOD3O60568 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.45■□□□□ 0.22
PLOD3O60568 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PLOD3O60568 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.45■□□□□ 0.22
PLOD3O60568 AC092329.2-201ENST00000598402 547 ntBASIC16.45■□□□□ 0.22
PLOD3O60568 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.45■□□□□ 0.22
PLOD3O60568 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.45■□□□□ 0.22
PLOD3O60568 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PLOD3O60568 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms