Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.12■□□□□ 0.33
DLX3O60479 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DLX3O60479 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DLX3O60479 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
DLX3O60479 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.11■□□□□ 0.33
DLX3O60479 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.11■□□□□ 0.33
DLX3O60479 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DLX3O60479 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.11■□□□□ 0.33
DLX3O60479 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.11■□□□□ 0.33
DLX3O60479 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.11■□□□□ 0.33
DLX3O60479 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 MYCLP1-201ENST00000372451 1075 ntBASIC17.11■□□□□ 0.33
DLX3O60479 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.11■□□□□ 0.33
DLX3O60479 AK4P3-201ENST00000418260 669 ntBASIC17.11■□□□□ 0.33
DLX3O60479 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.11■□□□□ 0.33
DLX3O60479 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.11■□□□□ 0.33
DLX3O60479 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.11■□□□□ 0.33
DLX3O60479 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.11■□□□□ 0.33
DLX3O60479 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DLX3O60479 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
DLX3O60479 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DLX3O60479 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
DLX3O60479 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.1■□□□□ 0.33
DLX3O60479 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.1■□□□□ 0.33
DLX3O60479 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.1■□□□□ 0.33
DLX3O60479 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.1■□□□□ 0.33
DLX3O60479 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.1■□□□□ 0.33
DLX3O60479 IGHV3-52-201ENST00000519770 353 ntBASIC17.1■□□□□ 0.33
DLX3O60479 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.1■□□□□ 0.33
DLX3O60479 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.1■□□□□ 0.33
DLX3O60479 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 AC083849.1-201ENST00000615227 514 ntBASIC17.1■□□□□ 0.33
DLX3O60479 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.1■□□□□ 0.33
DLX3O60479 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.1■□□□□ 0.33
DLX3O60479 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DLX3O60479 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DLX3O60479 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DLX3O60479 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
DLX3O60479 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DLX3O60479 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DLX3O60479 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DLX3O60479 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DLX3O60479 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.09■□□□□ 0.33
DLX3O60479 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
DLX3O60479 RNF216P1-203ENST00000404404 2427 ntBASIC17.09■□□□□ 0.33
DLX3O60479 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DLX3O60479 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.09■□□□□ 0.33
DLX3O60479 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
DLX3O60479 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DLX3O60479 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DLX3O60479 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DLX3O60479 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DLX3O60479 RN7SL606P-201ENST00000472779 293 ntBASIC17.09■□□□□ 0.33
DLX3O60479 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.09■□□□□ 0.33
DLX3O60479 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DLX3O60479 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.09■□□□□ 0.33
DLX3O60479 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.09■□□□□ 0.33
DLX3O60479 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
DLX3O60479 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DLX3O60479 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DLX3O60479 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DLX3O60479 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
DLX3O60479 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.09■□□□□ 0.33
DLX3O60479 AC125634.1-201ENST00000438758 1403 ntBASIC17.09■□□□□ 0.33
DLX3O60479 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.09■□□□□ 0.33
DLX3O60479 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DLX3O60479 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DLX3O60479 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
DLX3O60479 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DLX3O60479 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms