Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.38■□□□□ 0.21
FOXS1O43638 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.38■□□□□ 0.21
FOXS1O43638 RPL13AP23-201ENST00000480739 586 ntBASIC16.38■□□□□ 0.21
FOXS1O43638 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.38■□□□□ 0.21
FOXS1O43638 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXS1O43638 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.38■□□□□ 0.21
FOXS1O43638 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXS1O43638 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXS1O43638 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXS1O43638 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXS1O43638 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXS1O43638 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
FOXS1O43638 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXS1O43638 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXS1O43638 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXS1O43638 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
FOXS1O43638 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXS1O43638 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
FOXS1O43638 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXS1O43638 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXS1O43638 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
FOXS1O43638 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXS1O43638 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
FOXS1O43638 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXS1O43638 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.37■□□□□ 0.21
FOXS1O43638 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
FOXS1O43638 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXS1O43638 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXS1O43638 RNA5SP415-201ENST00000517246 115 ntBASIC16.37■□□□□ 0.21
FOXS1O43638 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXS1O43638 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.37■□□□□ 0.21
FOXS1O43638 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXS1O43638 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXS1O43638 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXS1O43638 MIR1199-201ENST00000621445 119 ntBASIC16.37■□□□□ 0.21
FOXS1O43638 AF228730.7-201ENST00000641842 219 ntBASIC16.37■□□□□ 0.21
FOXS1O43638 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
FOXS1O43638 AL590787.1-201ENST00000568856 1315 ntBASIC16.37■□□□□ 0.21
FOXS1O43638 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.37■□□□□ 0.21
FOXS1O43638 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.37■□□□□ 0.21
FOXS1O43638 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
FOXS1O43638 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXS1O43638 GPR89P-201ENST00000407924 1495 ntBASIC16.36■□□□□ 0.21
FOXS1O43638 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXS1O43638 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXS1O43638 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.36■□□□□ 0.21
FOXS1O43638 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
FOXS1O43638 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 UNC93B6-202ENST00000528242 690 ntBASIC16.36■□□□□ 0.21
FOXS1O43638 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.36■□□□□ 0.21
FOXS1O43638 AC145285.3-201ENST00000564603 959 ntBASIC16.36■□□□□ 0.21
FOXS1O43638 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 AC005593.1-201ENST00000624894 515 ntBASIC16.36■□□□□ 0.21
FOXS1O43638 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXS1O43638 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXS1O43638 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
FOXS1O43638 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXS1O43638 LETM1P2-201ENST00000597330 2178 ntBASIC16.36■□□□□ 0.21
FOXS1O43638 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXS1O43638 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXS1O43638 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
FOXS1O43638 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
FOXS1O43638 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
FOXS1O43638 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXS1O43638 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXS1O43638 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
FOXS1O43638 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXS1O43638 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXS1O43638 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.35■□□□□ 0.21
FOXS1O43638 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXS1O43638 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms