Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC002558.1-201ENST00000488906 803 ntBASIC17.38■□□□□ 0.37
PHGDHO43175 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
PHGDHO43175 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PHGDHO43175 RN7SL850P-201ENST00000579959 291 ntBASIC17.38■□□□□ 0.37
PHGDHO43175 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.38■□□□□ 0.37
PHGDHO43175 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.38■□□□□ 0.37
PHGDHO43175 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.38■□□□□ 0.37
PHGDHO43175 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.38■□□□□ 0.37
PHGDHO43175 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.38■□□□□ 0.37
PHGDHO43175 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.38■□□□□ 0.37
PHGDHO43175 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.38■□□□□ 0.37
PHGDHO43175 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PHGDHO43175 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PHGDHO43175 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PHGDHO43175 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.37■□□□□ 0.37
PHGDHO43175 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.37■□□□□ 0.37
PHGDHO43175 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.37■□□□□ 0.37
PHGDHO43175 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.37■□□□□ 0.37
PHGDHO43175 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.37■□□□□ 0.37
PHGDHO43175 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.37■□□□□ 0.37
PHGDHO43175 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PHGDHO43175 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PHGDHO43175 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.37■□□□□ 0.37
PHGDHO43175 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 AC097374.2-201ENST00000618617 1306 ntBASIC17.37■□□□□ 0.37
PHGDHO43175 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.37■□□□□ 0.37
PHGDHO43175 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.37■□□□□ 0.37
PHGDHO43175 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PHGDHO43175 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.37■□□□□ 0.37
PHGDHO43175 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHGDHO43175 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.36■□□□□ 0.37
PHGDHO43175 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHGDHO43175 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PHGDHO43175 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHGDHO43175 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHGDHO43175 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
PHGDHO43175 AC046185.3-201ENST00000623228 1824 ntBASIC17.36■□□□□ 0.37
PHGDHO43175 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHGDHO43175 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHGDHO43175 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PHGDHO43175 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.36■□□□□ 0.37
PHGDHO43175 AC007967.3-201ENST00000434308 558 ntBASIC17.36■□□□□ 0.37
PHGDHO43175 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.36■□□□□ 0.37
PHGDHO43175 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.36■□□□□ 0.37
PHGDHO43175 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.36■□□□□ 0.37
PHGDHO43175 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.36■□□□□ 0.37
PHGDHO43175 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHGDHO43175 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.36■□□□□ 0.37
PHGDHO43175 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PHGDHO43175 TNRC18P3-201ENST00000441896 2691 ntBASIC17.36■□□□□ 0.37
PHGDHO43175 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.36■□□□□ 0.37
PHGDHO43175 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHGDHO43175 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.36■□□□□ 0.37
PHGDHO43175 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHGDHO43175 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHGDHO43175 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHGDHO43175 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHGDHO43175 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.36■□□□□ 0.37
PHGDHO43175 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHGDHO43175 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.36■□□□□ 0.37
PHGDHO43175 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.35■□□□□ 0.37
PHGDHO43175 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.35■□□□□ 0.37
PHGDHO43175 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PHGDHO43175 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.35■□□□□ 0.37
PHGDHO43175 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PHGDHO43175 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 SLC25A1P3-201ENST00000395415 828 ntBASIC17.35■□□□□ 0.37
PHGDHO43175 RCN1P1-201ENST00000400413 996 ntBASIC17.35■□□□□ 0.37
PHGDHO43175 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHGDHO43175 TSPY22P-201ENST00000427496 604 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms