Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
ABCC4O15439 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ABCC4O15439 YBX2P1-201ENST00000394192 760 ntBASIC22.11■■□□□ 1.13
ABCC4O15439 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ABCC4O15439 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.11■■□□□ 1.13
ABCC4O15439 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.11■■□□□ 1.13
ABCC4O15439 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.11■■□□□ 1.13
ABCC4O15439 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.11■■□□□ 1.13
ABCC4O15439 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ABCC4O15439 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
ABCC4O15439 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ABCC4O15439 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
ABCC4O15439 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ABCC4O15439 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.11■■□□□ 1.13
ABCC4O15439 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ABCC4O15439 AL023806.1-201ENST00000603994 1649 ntBASIC22.11■■□□□ 1.13
ABCC4O15439 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ABCC4O15439 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
ABCC4O15439 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ABCC4O15439 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
ABCC4O15439 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ABCC4O15439 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ABCC4O15439 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC22.1■■□□□ 1.13
ABCC4O15439 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ABCC4O15439 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC22.1■■□□□ 1.13
ABCC4O15439 AC007967.2-201ENST00000432613 625 ntBASIC22.1■■□□□ 1.13
ABCC4O15439 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ABCC4O15439 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22.1■■□□□ 1.13
ABCC4O15439 AC009947.1-201ENST00000444350 727 ntBASIC22.1■■□□□ 1.13
ABCC4O15439 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.1■■□□□ 1.13
ABCC4O15439 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.1■■□□□ 1.13
ABCC4O15439 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ABCC4O15439 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.1■■□□□ 1.13
ABCC4O15439 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.1■■□□□ 1.13
ABCC4O15439 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ABCC4O15439 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ABCC4O15439 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ABCC4O15439 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC22.1■■□□□ 1.13
ABCC4O15439 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
ABCC4O15439 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ABCC4O15439 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ABCC4O15439 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ABCC4O15439 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC22.1■■□□□ 1.13
ABCC4O15439 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22.1■■□□□ 1.13
ABCC4O15439 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
ABCC4O15439 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
ABCC4O15439 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC22.1■■□□□ 1.13
ABCC4O15439 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
ABCC4O15439 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
ABCC4O15439 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ABCC4O15439 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
ABCC4O15439 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ABCC4O15439 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
ABCC4O15439 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.09■■□□□ 1.13
ABCC4O15439 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.09■■□□□ 1.13
ABCC4O15439 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ABCC4O15439 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.09■■□□□ 1.13
ABCC4O15439 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.09■■□□□ 1.13
ABCC4O15439 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.09■■□□□ 1.13
ABCC4O15439 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.09■■□□□ 1.13
ABCC4O15439 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ABCC4O15439 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
ABCC4O15439 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.09■■□□□ 1.13
ABCC4O15439 AL139424.1-201ENST00000607572 797 ntBASIC22.09■■□□□ 1.13
ABCC4O15439 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
ABCC4O15439 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ABCC4O15439 AL135999.2-201ENST00000622438 1686 ntBASIC22.09■■□□□ 1.13
ABCC4O15439 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC22.09■■□□□ 1.13
ABCC4O15439 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC22.09■■□□□ 1.13
ABCC4O15439 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
ABCC4O15439 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ABCC4O15439 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
ABCC4O15439 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 KRT18P27-201ENST00000427733 1299 ntBASIC22.08■■□□□ 1.13
ABCC4O15439 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC22.08■■□□□ 1.13
ABCC4O15439 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC22.08■■□□□ 1.13
ABCC4O15439 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.08■■□□□ 1.13
ABCC4O15439 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.08■■□□□ 1.13
ABCC4O15439 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC22.08■■□□□ 1.13
ABCC4O15439 AC040169.1-201ENST00000565382 521 ntBASIC22.08■■□□□ 1.13
ABCC4O15439 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 AL022326.1-202ENST00000641533 845 ntBASIC22.08■■□□□ 1.13
ABCC4O15439 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC22.08■■□□□ 1.13
ABCC4O15439 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ABCC4O15439 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
ABCC4O15439 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC22.08■■□□□ 1.12
ABCC4O15439 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ABCC4O15439 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC22.08■■□□□ 1.12
ABCC4O15439 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms