Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.68■□□□□ 0.58
CEP290O15078 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 AFG3L1P-217ENST00000557444 2447 ntBASIC18.68■□□□□ 0.58
CEP290O15078 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.68■□□□□ 0.58
CEP290O15078 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CEP290O15078 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CEP290O15078 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.67■□□□□ 0.58
CEP290O15078 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.67■□□□□ 0.58
CEP290O15078 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.67■□□□□ 0.58
CEP290O15078 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.67■□□□□ 0.58
CEP290O15078 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.67■□□□□ 0.58
CEP290O15078 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CEP290O15078 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CEP290O15078 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.67■□□□□ 0.58
CEP290O15078 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CEP290O15078 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CEP290O15078 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CEP290O15078 AC009949.1-201ENST00000623048 1830 ntBASIC18.67■□□□□ 0.58
CEP290O15078 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CEP290O15078 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CEP290O15078 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CEP290O15078 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.67■□□□□ 0.58
CEP290O15078 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CEP290O15078 HMGA1P7-201ENST00000406908 502 ntBASIC18.67■□□□□ 0.58
CEP290O15078 KRT223P-202ENST00000449164 1292 ntBASIC18.67■□□□□ 0.58
CEP290O15078 BNIP3P42-201ENST00000454982 569 ntBASIC18.67■□□□□ 0.58
CEP290O15078 SLC25A6P2-201ENST00000497974 877 ntBASIC18.67■□□□□ 0.58
CEP290O15078 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.67■□□□□ 0.58
CEP290O15078 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.67■□□□□ 0.58
CEP290O15078 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.67■□□□□ 0.58
CEP290O15078 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.67■□□□□ 0.58
CEP290O15078 BNIP3P29-201ENST00000598302 571 ntBASIC18.67■□□□□ 0.58
CEP290O15078 AC011447.5-201ENST00000616168 564 ntBASIC18.67■□□□□ 0.58
CEP290O15078 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CEP290O15078 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CEP290O15078 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CEP290O15078 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.67■□□□□ 0.58
CEP290O15078 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CEP290O15078 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CEP290O15078 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEP290O15078 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CEP290O15078 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.66■□□□□ 0.58
CEP290O15078 RHOQP1-201ENST00000555758 579 ntBASIC18.66■□□□□ 0.58
CEP290O15078 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEP290O15078 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CEP290O15078 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CEP290O15078 AC008267.7-201ENST00000624570 1194 ntBASIC18.66■□□□□ 0.58
CEP290O15078 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CEP290O15078 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEP290O15078 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CEP290O15078 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.66■□□□□ 0.58
CEP290O15078 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CEP290O15078 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CEP290O15078 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.66■□□□□ 0.58
CEP290O15078 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.66■□□□□ 0.58
CEP290O15078 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.66■□□□□ 0.58
CEP290O15078 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.66■□□□□ 0.58
CEP290O15078 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CEP290O15078 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.66■□□□□ 0.58
CEP290O15078 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CEP290O15078 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.66■□□□□ 0.58
CEP290O15078 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.66■□□□□ 0.58
CEP290O15078 BTBD7P1-201ENST00000447253 1453 ntBASIC18.66■□□□□ 0.58
CEP290O15078 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.66■□□□□ 0.58
CEP290O15078 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CEP290O15078 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.66■□□□□ 0.58
CEP290O15078 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CEP290O15078 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.66■□□□□ 0.58
CEP290O15078 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.65■□□□□ 0.58
CEP290O15078 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CEP290O15078 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.65■□□□□ 0.58
CEP290O15078 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.65■□□□□ 0.58
CEP290O15078 IGHV3-62-201ENST00000520057 340 ntBASIC18.65■□□□□ 0.58
CEP290O15078 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.65■□□□□ 0.58
CEP290O15078 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.65■□□□□ 0.58
CEP290O15078 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.65■□□□□ 0.58
CEP290O15078 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.65■□□□□ 0.58
CEP290O15078 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.65■□□□□ 0.58
CEP290O15078 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CEP290O15078 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 AC092506.1-202ENST00000401022 528 ntBASIC18.65■□□□□ 0.58
CEP290O15078 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.65■□□□□ 0.58
CEP290O15078 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 AC004840.1-201ENST00000636359 365 ntBASIC18.65■□□□□ 0.58
CEP290O15078 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CEP290O15078 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.65■□□□□ 0.58
CEP290O15078 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CEP290O15078 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CEP290O15078 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms