Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 HLA-V-204ENST00000476601 1289 ntBASIC29.46■■■□□ 2.31
CUX2O14529 MFF-223ENST00000524634 647 ntTSL 2 BASIC29.46■■■□□ 2.31
CUX2O14529 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC29.46■■■□□ 2.31
CUX2O14529 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC29.46■■■□□ 2.31
CUX2O14529 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CUX2O14529 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC29.46■■■□□ 2.31
CUX2O14529 AP000842.3-202ENST00000569238 1080 ntBASIC29.46■■■□□ 2.31
CUX2O14529 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
CUX2O14529 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CUX2O14529 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CUX2O14529 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CUX2O14529 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CUX2O14529 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC29.46■■■□□ 2.31
CUX2O14529 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC29.45■■■□□ 2.31
CUX2O14529 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
CUX2O14529 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CUX2O14529 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CUX2O14529 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CUX2O14529 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CUX2O14529 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
CUX2O14529 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC29.45■■■□□ 2.31
CUX2O14529 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CUX2O14529 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CUX2O14529 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
CUX2O14529 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC29.45■■■□□ 2.31
CUX2O14529 SATB1-217ENST00000493952 626 ntTSL 3 BASIC29.45■■■□□ 2.31
CUX2O14529 SLC25A6P2-201ENST00000497974 877 ntBASIC29.45■■■□□ 2.31
CUX2O14529 FUZ-207ENST00000526575 482 ntTSL 4 BASIC29.45■■■□□ 2.31
CUX2O14529 AL844908.2-201ENST00000609461 460 ntBASIC29.45■■■□□ 2.31
CUX2O14529 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC29.45■■■□□ 2.3
CUX2O14529 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.3
CUX2O14529 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.3
CUX2O14529 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
CUX2O14529 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC29.44■■■□□ 2.3
CUX2O14529 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC29.44■■■□□ 2.3
CUX2O14529 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CUX2O14529 ANKRD19P-201ENST00000338192 862 ntBASIC29.44■■■□□ 2.3
CUX2O14529 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
CUX2O14529 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC29.44■■■□□ 2.3
CUX2O14529 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CUX2O14529 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC29.44■■■□□ 2.3
CUX2O14529 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
CUX2O14529 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC29.44■■■□□ 2.3
CUX2O14529 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC29.44■■■□□ 2.3
CUX2O14529 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC29.44■■■□□ 2.3
CUX2O14529 CD7-202ENST00000578509 925 ntTSL 3 BASIC29.44■■■□□ 2.3
CUX2O14529 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CUX2O14529 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CUX2O14529 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CUX2O14529 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CUX2O14529 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC29.44■■■□□ 2.3
CUX2O14529 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC29.44■■■□□ 2.3
CUX2O14529 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC29.44■■■□□ 2.3
CUX2O14529 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CUX2O14529 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC29.44■■■□□ 2.3
CUX2O14529 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CUX2O14529 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
CUX2O14529 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC29.43■■■□□ 2.3
CUX2O14529 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CUX2O14529 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CUX2O14529 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CUX2O14529 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC29.43■■■□□ 2.3
CUX2O14529 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
CUX2O14529 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC29.43■■■□□ 2.3
CUX2O14529 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC29.43■■■□□ 2.3
CUX2O14529 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CUX2O14529 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC29.43■■■□□ 2.3
CUX2O14529 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CUX2O14529 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CUX2O14529 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC29.43■■■□□ 2.3
CUX2O14529 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CUX2O14529 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
CUX2O14529 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
CUX2O14529 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CUX2O14529 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CUX2O14529 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC29.43■■■□□ 2.3
CUX2O14529 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC29.43■■■□□ 2.3
CUX2O14529 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
CUX2O14529 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CUX2O14529 PHGDH-209ENST00000641074 1780 ntBASIC29.43■■■□□ 2.3
CUX2O14529 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CUX2O14529 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC29.42■■■□□ 2.3
CUX2O14529 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CUX2O14529 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC29.42■■■□□ 2.3
CUX2O14529 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
CUX2O14529 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CUX2O14529 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC29.42■■■□□ 2.3
CUX2O14529 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CUX2O14529 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CUX2O14529 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC29.42■■■□□ 2.3
CUX2O14529 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CUX2O14529 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
CUX2O14529 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CUX2O14529 AC116562.4-201ENST00000641316 2276 ntBASIC29.42■■■□□ 2.3
CUX2O14529 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC29.42■■■□□ 2.3
CUX2O14529 AC009336.1-201ENST00000608941 1553 ntBASIC29.42■■■□□ 2.3
CUX2O14529 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC29.42■■■□□ 2.3
CUX2O14529 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC29.42■■■□□ 2.3
CUX2O14529 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CUX2O14529 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms