Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK2O00526 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK2O00526 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK2O00526 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK2O00526 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK2O00526 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK2O00526 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14□□□□□ -0.17
UPK2O00526 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14□□□□□ -0.17
UPK2O00526 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
UPK2O00526 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14□□□□□ -0.17
UPK2O00526 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14□□□□□ -0.17
UPK2O00526 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14□□□□□ -0.17
UPK2O00526 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
UPK2O00526 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14□□□□□ -0.17
UPK2O00526 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
UPK2O00526 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
UPK2O00526 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14□□□□□ -0.17
UPK2O00526 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 SLC25A1P3-201ENST00000395415 828 ntBASIC14□□□□□ -0.17
UPK2O00526 AC122714.2-201ENST00000502787 707 ntBASIC14□□□□□ -0.17
UPK2O00526 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14□□□□□ -0.17
UPK2O00526 AC022616.7-201ENST00000525383 220 ntBASIC14□□□□□ -0.17
UPK2O00526 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14□□□□□ -0.17
UPK2O00526 LINC01238-205ENST00000567549 1107 ntBASIC14□□□□□ -0.17
UPK2O00526 AL353801.3-201ENST00000609898 542 ntBASIC14□□□□□ -0.17
UPK2O00526 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
UPK2O00526 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14□□□□□ -0.17
UPK2O00526 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14□□□□□ -0.17
UPK2O00526 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14□□□□□ -0.17
UPK2O00526 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK2O00526 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
UPK2O00526 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
UPK2O00526 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14□□□□□ -0.17
UPK2O00526 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 AC046185.3-201ENST00000623228 1824 ntBASIC13.99□□□□□ -0.17
UPK2O00526 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK2O00526 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UPK2O00526 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UPK2O00526 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
UPK2O00526 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
UPK2O00526 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
UPK2O00526 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
UPK2O00526 AC103564.2-201ENST00000432853 1299 ntBASIC13.99□□□□□ -0.17
UPK2O00526 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.99□□□□□ -0.17
UPK2O00526 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
UPK2O00526 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.99□□□□□ -0.17
UPK2O00526 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK2O00526 AC111152.3-201ENST00000569699 673 ntBASIC13.99□□□□□ -0.17
UPK2O00526 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 AC090616.6-201ENST00000582640 721 ntBASIC13.99□□□□□ -0.17
UPK2O00526 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.99□□□□□ -0.17
UPK2O00526 AL592071.1-201ENST00000611956 408 ntBASIC13.99□□□□□ -0.17
UPK2O00526 IGHV3-41-201ENST00000613121 348 ntBASIC13.99□□□□□ -0.17
UPK2O00526 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK2O00526 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK2O00526 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.99□□□□□ -0.17
UPK2O00526 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
UPK2O00526 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.99□□□□□ -0.17
UPK2O00526 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UPK2O00526 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms