Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.43■■□□□ 1.34
SBNO1A3KN83 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.43■■□□□ 1.34
SBNO1A3KN83 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SBNO1A3KN83 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SBNO1A3KN83 GK-202ENST00000378941 458 ntTSL 3 BASIC23.43■■□□□ 1.34
SBNO1A3KN83 SPDYE14P-201ENST00000442619 822 ntBASIC23.43■■□□□ 1.34
SBNO1A3KN83 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC23.43■■□□□ 1.34
SBNO1A3KN83 BAD-207ENST00000544785 525 ntTSL 3 BASIC23.43■■□□□ 1.34
SBNO1A3KN83 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC23.43■■□□□ 1.34
SBNO1A3KN83 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
SBNO1A3KN83 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SBNO1A3KN83 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SBNO1A3KN83 FO538757.1-201ENST00000623083 1397 ntBASIC23.43■■□□□ 1.34
SBNO1A3KN83 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC23.43■■□□□ 1.34
SBNO1A3KN83 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SBNO1A3KN83 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.43■■□□□ 1.34
SBNO1A3KN83 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC23.43■■□□□ 1.34
SBNO1A3KN83 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC23.43■■□□□ 1.34
SBNO1A3KN83 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SBNO1A3KN83 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SBNO1A3KN83 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
SBNO1A3KN83 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SBNO1A3KN83 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC23.43■■□□□ 1.34
SBNO1A3KN83 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SBNO1A3KN83 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SBNO1A3KN83 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SBNO1A3KN83 RAC2-204ENST00000406508 893 ntTSL 5 BASIC23.42■■□□□ 1.34
SBNO1A3KN83 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC23.42■■□□□ 1.34
SBNO1A3KN83 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC23.42■■□□□ 1.34
SBNO1A3KN83 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC23.42■■□□□ 1.34
SBNO1A3KN83 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC23.42■■□□□ 1.34
SBNO1A3KN83 LINC01225-203ENST00000563550 1244 ntBASIC23.42■■□□□ 1.34
SBNO1A3KN83 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC23.42■■□□□ 1.34
SBNO1A3KN83 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC23.42■■□□□ 1.34
SBNO1A3KN83 AL158211.3-201ENST00000607385 239 ntBASIC23.42■■□□□ 1.34
SBNO1A3KN83 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
SBNO1A3KN83 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC23.42■■□□□ 1.34
SBNO1A3KN83 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SBNO1A3KN83 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC23.42■■□□□ 1.34
SBNO1A3KN83 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC23.42■■□□□ 1.34
SBNO1A3KN83 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SBNO1A3KN83 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SBNO1A3KN83 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SBNO1A3KN83 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SBNO1A3KN83 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC23.41■■□□□ 1.34
SBNO1A3KN83 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC23.41■■□□□ 1.34
SBNO1A3KN83 MMP17-203ENST00000535004 719 ntTSL 3 BASIC23.41■■□□□ 1.34
SBNO1A3KN83 LINC02560-201ENST00000596379 459 ntBASIC23.41■■□□□ 1.34
SBNO1A3KN83 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC23.41■■□□□ 1.34
SBNO1A3KN83 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SBNO1A3KN83 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
SBNO1A3KN83 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC23.41■■□□□ 1.34
SBNO1A3KN83 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC23.41■■□□□ 1.34
SBNO1A3KN83 AMT-250ENST00000637682 1823 ntTSL 5 BASIC23.41■■□□□ 1.34
SBNO1A3KN83 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SBNO1A3KN83 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC23.41■■□□□ 1.34
SBNO1A3KN83 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SBNO1A3KN83 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SBNO1A3KN83 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC23.4■■□□□ 1.34
SBNO1A3KN83 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SBNO1A3KN83 TREML5P-201ENST00000421694 576 ntBASIC23.4■■□□□ 1.34
SBNO1A3KN83 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC23.4■■□□□ 1.34
SBNO1A3KN83 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC23.4■■□□□ 1.34
SBNO1A3KN83 RBPMS2P1-201ENST00000437762 623 ntBASIC23.4■■□□□ 1.34
SBNO1A3KN83 DUX4L17-201ENST00000557360 1267 ntBASIC23.4■■□□□ 1.34
SBNO1A3KN83 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
SBNO1A3KN83 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC23.4■■□□□ 1.34
SBNO1A3KN83 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC23.4■■□□□ 1.34
SBNO1A3KN83 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
SBNO1A3KN83 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SBNO1A3KN83 AC046185.3-201ENST00000623228 1824 ntBASIC23.4■■□□□ 1.34
SBNO1A3KN83 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SBNO1A3KN83 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
SBNO1A3KN83 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC23.4■■□□□ 1.34
SBNO1A3KN83 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SBNO1A3KN83 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SBNO1A3KN83 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SBNO1A3KN83 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC23.4■■□□□ 1.34
SBNO1A3KN83 SLC25A39P2-201ENST00000537614 270 ntBASIC23.4■■□□□ 1.34
SBNO1A3KN83 AC026150.2-201ENST00000564693 1156 ntBASIC23.4■■□□□ 1.34
SBNO1A3KN83 MNT-208ENST00000575394 606 ntTSL 4 BASIC23.4■■□□□ 1.34
SBNO1A3KN83 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SBNO1A3KN83 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC23.39■■□□□ 1.34
SBNO1A3KN83 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC23.39■■□□□ 1.34
SBNO1A3KN83 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC23.39■■□□□ 1.34
SBNO1A3KN83 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
SBNO1A3KN83 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.39■■□□□ 1.33
SBNO1A3KN83 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
SBNO1A3KN83 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SBNO1A3KN83 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SBNO1A3KN83 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
SBNO1A3KN83 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC23.39■■□□□ 1.33
SBNO1A3KN83 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SBNO1A3KN83 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
SBNO1A3KN83 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
SBNO1A3KN83 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC23.39■■□□□ 1.33
SBNO1A3KN83 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SBNO1A3KN83 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC23.39■■□□□ 1.33
SBNO1A3KN83 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SBNO1A3KN83 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms