Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 AC060834.1-201ENST00000443027 2032 ntBASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 AC106886.4-201ENST00000623557 2502 ntBASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 AC113347.1-201ENST00000413321 391 ntBASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 FGF14-AS2-201ENST00000606448 1074 ntBASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00959A0A1B0GUT2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 AC097374.2-201ENST00000618617 1306 ntBASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 HBZP1-201ENST00000354915 429 ntBASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 MYCLP1-201ENST00000372451 1075 ntBASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 COX5BP2-201ENST00000392354 334 ntBASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 HOMER2P1-201ENST00000455653 964 ntBASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 AC005332.3-201ENST00000589904 676 ntBASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
LINC00959A0A1B0GUT2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms