Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DOC2GP-204ENST00000639052 2548 ntBASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 AC092053.1-201ENST00000605787 1936 ntBASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 KRT8P9-201ENST00000558927 1449 ntBASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 LINC01311-201ENST00000565162 1445 ntBASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 AL355075.4-201ENST00000554988 638 ntBASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 AC024563.2-201ENST00000603282 481 ntBASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV5A0A0B4J249 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV5A0A0B4J249 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV5A0A0B4J249 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV5A0A0B4J249 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV5A0A0B4J249 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRAV5A0A0B4J249 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.58□□□□□ -0.23
TRAV5A0A0B4J249 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
TRAV5A0A0B4J249 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.58□□□□□ -0.23
TRAV5A0A0B4J249 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 ECEL1P2-202ENST00000465689 757 ntBASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 NEK4P2-201ENST00000580004 1012 ntBASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV5A0A0B4J249 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV5A0A0B4J249 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 428.3 ms