Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 AC034232.1-201ENST00000506026 1064 ntBASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 AC024243.1-201ENST00000609234 778 ntBASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.07■□□□□ 0.8
R3HCC1Q9Y3T6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 TSPY5P-201ENST00000426936 936 ntBASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 AC104076.2-201ENST00000448912 469 ntBASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 AC011558.1-201ENST00000623459 338 ntBASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
R3HCC1Q9Y3T6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 HOMER2P1-201ENST00000455653 964 ntBASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 DUX4L26-201ENST00000489078 1255 ntBASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 AC009065.1-201ENST00000564055 1225 ntBASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 AL590326.2-201ENST00000625139 305 ntBASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 NFIC-211ENST00000641145 8399 ntBASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 PCDHB17P-201ENST00000539533 2393 ntBASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
R3HCC1Q9Y3T6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 HOXB1-202ENST00000577092 1414 ntBASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 MTMR9LP-203ENST00000426597 1545 ntBASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 AC006011.2-201ENST00000621313 1158 ntBASIC20.04■□□□□ 0.8
R3HCC1Q9Y3T6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms