Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
UBE2D4Q9Y2X8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 AC112698.1-201ENST00000510299 916 ntBASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 Z99916.2-201ENST00000604037 246 ntBASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 PCDH8P1-201ENST00000428983 2773 ntBASIC12.18□□□□□ -0.46
UBE2D4Q9Y2X8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 FER1L4-210ENST00000615531 5998 ntBASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 AC093525.9-201ENST00000624961 1746 ntBASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 TSPY20P-201ENST00000450910 630 ntBASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2D4Q9Y2X8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms