Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 RN7SKP199-201ENST00000410325 305 ntBASIC16.53■□□□□ 0.24
LHX6Q9UPM6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 UPF3AP2-201ENST00000457924 1132 ntBASIC16.53■□□□□ 0.24
LHX6Q9UPM6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LHX6Q9UPM6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 ARSEP1-201ENST00000420443 635 ntBASIC16.52■□□□□ 0.24
LHX6Q9UPM6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 CRB3P1-201ENST00000449338 276 ntBASIC16.52■□□□□ 0.24
LHX6Q9UPM6 UGT1A2P-201ENST00000454886 866 ntBASIC16.52■□□□□ 0.24
LHX6Q9UPM6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 KRT19P2-202ENST00000557173 1012 ntBASIC16.52■□□□□ 0.24
LHX6Q9UPM6 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 AC022145.2-201ENST00000598203 171 ntBASIC16.52■□□□□ 0.24
LHX6Q9UPM6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 AL353135.1-201ENST00000606729 504 ntBASIC16.52■□□□□ 0.24
LHX6Q9UPM6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LHX6Q9UPM6 AL133373.2-201ENST00000623187 2828 ntBASIC16.52■□□□□ 0.23
LHX6Q9UPM6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LHX6Q9UPM6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.52■□□□□ 0.23
LHX6Q9UPM6 AC099343.3-201ENST00000605834 2503 ntBASIC16.52■□□□□ 0.23
LHX6Q9UPM6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.52■□□□□ 0.23
LHX6Q9UPM6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LHX6Q9UPM6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LHX6Q9UPM6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.52■□□□□ 0.23
LHX6Q9UPM6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LHX6Q9UPM6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LHX6Q9UPM6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 AC074386.1-202ENST00000463561 864 ntBASIC16.51■□□□□ 0.23
LHX6Q9UPM6 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LHX6Q9UPM6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.5■□□□□ 0.23
LHX6Q9UPM6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LHX6Q9UPM6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms