Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 AP001269.4-201ENST00000609611 512 ntBASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 AC084018.2-201ENST00000613093 2607 ntBASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 TNRC18P3-201ENST00000441896 2691 ntBASIC17.53■□□□□ 0.4
CNOT6Q9ULM6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 AC108860.2-201ENST00000562760 2183 ntBASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 AC004870.1-201ENST00000315132 882 ntBASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 ABCD1P5-201ENST00000445663 754 ntBASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 AC079781.3-201ENST00000449110 356 ntBASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 SAPCD2P3-201ENST00000455031 850 ntBASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 AC106795.1-205ENST00000512851 1056 ntBASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT6Q9ULM6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
CNOT6Q9ULM6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 FAAHP1-202ENST00000446499 1238 ntBASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 AC006116.8-202ENST00000587620 1550 ntBASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 AL031008.1-201ENST00000619963 541 ntBASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 AD001527.2-201ENST00000622994 785 ntBASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 AP000867.4-201ENST00000641616 219 ntBASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT6Q9ULM6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 AL049757.1-201ENST00000616842 1596 ntBASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 AP005117.1-201ENST00000584346 1413 ntBASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT6Q9ULM6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms