Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HDAC6Q9UBN7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 AC093010.1-201ENST00000473625 1624 ntBASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 AL591424.1-201ENST00000442569 1213 ntBASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 KRT18P3-201ENST00000451602 1288 ntBASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 AC122714.2-201ENST00000502787 707 ntBASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 AD001527.2-201ENST00000622994 785 ntBASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HDAC6Q9UBN7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 AC005104.2-201ENST00000427818 678 ntBASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 AL022326.1-202ENST00000641533 845 ntBASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HDAC6Q9UBN7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 AC092183.1-201ENST00000469884 875 ntBASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
HDAC6Q9UBN7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms