Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.14■□□□□ 0.01
TREM2Q9NZC2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
TREM2Q9NZC2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.12■□□□□ 0.01
TREM2Q9NZC2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms