Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 SLC25A1P3-201ENST00000395415 828 ntBASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 AL022326.1-202ENST00000641533 845 ntBASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.24■□□□□ 0.99
ECHDC1Q9NTX5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ECHDC1Q9NTX5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 SCARNA2-201ENST00000458748 420 ntBASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 AL121912.1-201ENST00000603683 238 ntBASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.22■□□□□ 0.99
ECHDC1Q9NTX5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ECHDC1Q9NTX5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms