Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 AP000867.3-201ENST00000524675 377 ntBASIC18.72■□□□□ 0.59
SIX2Q9NPC8 AC092329.2-201ENST00000598402 547 ntBASIC18.72■□□□□ 0.59
SIX2Q9NPC8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX2Q9NPC8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 AC148477.5-201ENST00000625164 1645 ntBASIC18.71■□□□□ 0.59
SIX2Q9NPC8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 AC005915.1-201ENST00000624912 2018 ntBASIC18.71■□□□□ 0.59
SIX2Q9NPC8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 AC010331.1-201ENST00000611423 582 ntBASIC18.71■□□□□ 0.59
SIX2Q9NPC8 AP000867.4-201ENST00000641616 219 ntBASIC18.71■□□□□ 0.59
SIX2Q9NPC8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 EGFEM1P-202ENST00000431685 1563 ntBASIC18.71■□□□□ 0.59
SIX2Q9NPC8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX2Q9NPC8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 AC012615.1-201ENST00000565797 1299 ntBASIC18.7■□□□□ 0.58
SIX2Q9NPC8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 AC091076.1-201ENST00000610741 619 ntBASIC18.7■□□□□ 0.58
SIX2Q9NPC8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 AC105020.1-201ENST00000435356 2205 ntBASIC18.7■□□□□ 0.58
SIX2Q9NPC8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 AC084018.2-201ENST00000613093 2607 ntBASIC18.7■□□□□ 0.58
SIX2Q9NPC8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SIX2Q9NPC8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SIX2Q9NPC8 ARMC10P1-201ENST00000313754 855 ntBASIC18.69■□□□□ 0.58
SIX2Q9NPC8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms