Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LRTM1Q9HBL6 AC060834.1-201ENST00000443027 2032 ntBASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 TMPOP1-202ENST00000424642 1267 ntBASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 AC007967.3-201ENST00000434308 558 ntBASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 IGHV3-52-201ENST00000519770 353 ntBASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRTM1Q9HBL6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 TSPY22P-201ENST00000427496 604 ntBASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 LINC01238-205ENST00000567549 1107 ntBASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 AC109462.3-201ENST00000573934 613 ntBASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 AC019129.2-201ENST00000609837 1235 ntBASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.79■□□□□ 0.28
LRTM1Q9HBL6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRTM1Q9HBL6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms