Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AC139713.2-201ENST00000641328 2723 ntBASIC20.3■□□□□ 0.84
EFCC1Q9HA90 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EFCC1Q9HA90 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EFCC1Q9HA90 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EFCC1Q9HA90 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
EFCC1Q9HA90 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EFCC1Q9HA90 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 PHGDH-209ENST00000641074 1780 ntBASIC20.29■□□□□ 0.84
EFCC1Q9HA90 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
EFCC1Q9HA90 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 BCAR1-209ENST00000546196 1340 ntBASIC20.28■□□□□ 0.84
EFCC1Q9HA90 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.28■□□□□ 0.84
EFCC1Q9HA90 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 RPS15P9-201ENST00000494093 319 ntBASIC20.28■□□□□ 0.84
EFCC1Q9HA90 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EFCC1Q9HA90 AC093010.1-201ENST00000473625 1624 ntBASIC20.27■□□□□ 0.84
EFCC1Q9HA90 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 COX5BP2-201ENST00000392354 334 ntBASIC20.27■□□□□ 0.84
EFCC1Q9HA90 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 IGLL3P-201ENST00000412472 434 ntBASIC20.27■□□□□ 0.84
EFCC1Q9HA90 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 AC103564.2-201ENST00000432853 1299 ntBASIC20.27■□□□□ 0.84
EFCC1Q9HA90 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 AL513210.1-201ENST00000629608 234 ntBASIC20.27■□□□□ 0.84
EFCC1Q9HA90 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCC1Q9HA90 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.27■□□□□ 0.83
EFCC1Q9HA90 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.27■□□□□ 0.83
EFCC1Q9HA90 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
EFCC1Q9HA90 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFCC1Q9HA90 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms