Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF41Q9H4P4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF41Q9H4P4 AC016396.2-201ENST00000562575 1417 ntBASIC20.58■□□□□ 0.88
RNF41Q9H4P4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF41Q9H4P4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF41Q9H4P4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.58■□□□□ 0.88
RNF41Q9H4P4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RNF41Q9H4P4 AL135999.2-201ENST00000622438 1686 ntBASIC20.58■□□□□ 0.88
RNF41Q9H4P4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 RPS2P28-201ENST00000314255 741 ntBASIC20.57■□□□□ 0.88
RNF41Q9H4P4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 LAGE3P1-201ENST00000425356 484 ntBASIC20.57■□□□□ 0.88
RNF41Q9H4P4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 NCF1C-201ENST00000438382 1427 ntBASIC20.57■□□□□ 0.88
RNF41Q9H4P4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 AL773604.1-201ENST00000617417 272 ntBASIC20.57■□□□□ 0.88
RNF41Q9H4P4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RNF41Q9H4P4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 AC097637.2-201ENST00000624096 1997 ntBASIC20.56■□□□□ 0.88
RNF41Q9H4P4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 AC026396.1-201ENST00000419388 421 ntBASIC20.56■□□□□ 0.88
RNF41Q9H4P4 ACTG1P4-201ENST00000425123 1122 ntBASIC20.56■□□□□ 0.88
RNF41Q9H4P4 AC009078.2-202ENST00000463353 338 ntBASIC20.56■□□□□ 0.88
RNF41Q9H4P4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 OR7E14P-202ENST00000530490 1290 ntBASIC20.56■□□□□ 0.88
RNF41Q9H4P4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 AC139887.3-201ENST00000568585 713 ntBASIC20.56■□□□□ 0.88
RNF41Q9H4P4 SLC25A6P4-201ENST00000586535 553 ntBASIC20.56■□□□□ 0.88
RNF41Q9H4P4 AC107918.4-202ENST00000641623 219 ntBASIC20.56■□□□□ 0.88
RNF41Q9H4P4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF41Q9H4P4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 MRPL3P1-201ENST00000400109 1033 ntBASIC20.55■□□□□ 0.88
RNF41Q9H4P4 RPS2P1-201ENST00000434010 821 ntBASIC20.55■□□□□ 0.88
RNF41Q9H4P4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF41Q9H4P4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF41Q9H4P4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms