Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 TNRC18P3-201ENST00000441896 2691 ntBASIC15.46■□□□□ 0.07
COMMD4Q9H0A8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.46■□□□□ 0.06
COMMD4Q9H0A8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
COMMD4Q9H0A8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.46■□□□□ 0.06
COMMD4Q9H0A8 AC106886.4-201ENST00000623557 2502 ntBASIC15.46■□□□□ 0.06
COMMD4Q9H0A8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
COMMD4Q9H0A8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
COMMD4Q9H0A8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
COMMD4Q9H0A8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD4Q9H0A8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 AC063926.3-201ENST00000624734 5658 ntBASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 MMP23A-201ENST00000234610 1017 ntBASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 TSPY12P-201ENST00000421279 868 ntBASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 ECEL1P2-202ENST00000465689 757 ntBASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 FAM87A-204ENST00000613235 858 ntBASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 AC010947.1-201ENST00000623454 693 ntBASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 CYP2D8P-201ENST00000433633 1490 ntBASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD4Q9H0A8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms