Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 AF186192.3-201ENST00000583427 947 ntBASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSBP4Q9BWG4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 AC092850.2-201ENST00000623821 2697 ntBASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 AC009065.1-201ENST00000564055 1225 ntBASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 RARRES2P10-201ENST00000564312 460 ntBASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 AKR1B10P2-201ENST00000577332 927 ntBASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 HLA-J-201ENST00000462773 1622 ntBASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSBP4Q9BWG4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms