Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CGREF1Q99674 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.63■□□□□ 0.25
CGREF1Q99674 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 KRT18P48-201ENST00000434763 852 ntBASIC16.63■□□□□ 0.25
CGREF1Q99674 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 RASA4DP-201ENST00000460726 1199 ntBASIC16.63■□□□□ 0.25
CGREF1Q99674 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CGREF1Q99674 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.63■□□□□ 0.25
CGREF1Q99674 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CGREF1Q99674 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.63■□□□□ 0.25
CGREF1Q99674 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 AC141257.4-201ENST00000634557 245 ntBASIC16.63■□□□□ 0.25
CGREF1Q99674 AC136944.6-201ENST00000634818 245 ntBASIC16.63■□□□□ 0.25
CGREF1Q99674 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.63■□□□□ 0.25
CGREF1Q99674 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CGREF1Q99674 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CGREF1Q99674 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
CGREF1Q99674 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CGREF1Q99674 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CGREF1Q99674 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.62■□□□□ 0.25
CGREF1Q99674 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CGREF1Q99674 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.62■□□□□ 0.25
CGREF1Q99674 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.62■□□□□ 0.25
CGREF1Q99674 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.62■□□□□ 0.25
CGREF1Q99674 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.62■□□□□ 0.25
CGREF1Q99674 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.62■□□□□ 0.25
CGREF1Q99674 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.62■□□□□ 0.25
CGREF1Q99674 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.62■□□□□ 0.25
CGREF1Q99674 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.62■□□□□ 0.25
CGREF1Q99674 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.62■□□□□ 0.25
CGREF1Q99674 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.62■□□□□ 0.25
CGREF1Q99674 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.62■□□□□ 0.25
CGREF1Q99674 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CGREF1Q99674 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CGREF1Q99674 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.62■□□□□ 0.25
CGREF1Q99674 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CGREF1Q99674 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CGREF1Q99674 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CGREF1Q99674 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CGREF1Q99674 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.61■□□□□ 0.25
CGREF1Q99674 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CGREF1Q99674 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.61■□□□□ 0.25
CGREF1Q99674 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.61■□□□□ 0.25
CGREF1Q99674 SLC25A1P3-201ENST00000395415 828 ntBASIC16.61■□□□□ 0.25
CGREF1Q99674 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.61■□□□□ 0.25
CGREF1Q99674 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.61■□□□□ 0.25
CGREF1Q99674 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.61■□□□□ 0.25
CGREF1Q99674 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.61■□□□□ 0.25
CGREF1Q99674 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.61■□□□□ 0.25
CGREF1Q99674 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CGREF1Q99674 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CGREF1Q99674 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.61■□□□□ 0.25
CGREF1Q99674 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.61■□□□□ 0.25
CGREF1Q99674 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms