Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDCA3Q99618 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
CDCA3Q99618 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.03■□□□□ 0.48
CDCA3Q99618 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.03■□□□□ 0.48
CDCA3Q99618 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CDCA3Q99618 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDCA3Q99618 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDCA3Q99618 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.02■□□□□ 0.48
CDCA3Q99618 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.02■□□□□ 0.48
CDCA3Q99618 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDCA3Q99618 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDCA3Q99618 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.02■□□□□ 0.48
CDCA3Q99618 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDCA3Q99618 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDCA3Q99618 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDCA3Q99618 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.02■□□□□ 0.48
CDCA3Q99618 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.02■□□□□ 0.48
CDCA3Q99618 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDCA3Q99618 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDCA3Q99618 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.02■□□□□ 0.48
CDCA3Q99618 AC005412.3-201ENST00000580309 715 ntBASIC18.02■□□□□ 0.48
CDCA3Q99618 AL158211.3-201ENST00000607385 239 ntBASIC18.02■□□□□ 0.48
CDCA3Q99618 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDCA3Q99618 AC084121.4-201ENST00000641598 221 ntBASIC18.02■□□□□ 0.48
CDCA3Q99618 AF228730.8-201ENST00000642140 221 ntBASIC18.02■□□□□ 0.48
CDCA3Q99618 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.02■□□□□ 0.47
CDCA3Q99618 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CDCA3Q99618 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.02■□□□□ 0.47
CDCA3Q99618 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CDCA3Q99618 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CDCA3Q99618 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDCA3Q99618 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDCA3Q99618 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA3Q99618 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA3Q99618 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA3Q99618 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.01■□□□□ 0.47
CDCA3Q99618 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA3Q99618 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CDCA3Q99618 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA3Q99618 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA3Q99618 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA3Q99618 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.01■□□□□ 0.47
CDCA3Q99618 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.01■□□□□ 0.47
CDCA3Q99618 AC008761.3-201ENST00000624803 892 ntBASIC18.01■□□□□ 0.47
CDCA3Q99618 AC135776.1-201ENST00000319817 2481 ntBASIC18.01■□□□□ 0.47
CDCA3Q99618 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.01■□□□□ 0.47
CDCA3Q99618 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CDCA3Q99618 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDCA3Q99618 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA3Q99618 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA3Q99618 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.01■□□□□ 0.47
CDCA3Q99618 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.01■□□□□ 0.47
CDCA3Q99618 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA3Q99618 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA3Q99618 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18■□□□□ 0.47
CDCA3Q99618 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDCA3Q99618 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDCA3Q99618 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18■□□□□ 0.47
CDCA3Q99618 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CDCA3Q99618 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18■□□□□ 0.47
CDCA3Q99618 GAPDHP21-201ENST00000450301 1010 ntBASIC18■□□□□ 0.47
CDCA3Q99618 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18■□□□□ 0.47
CDCA3Q99618 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18■□□□□ 0.47
CDCA3Q99618 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18■□□□□ 0.47
CDCA3Q99618 LINC01225-203ENST00000563550 1244 ntBASIC18■□□□□ 0.47
CDCA3Q99618 AC026150.2-201ENST00000564693 1156 ntBASIC18■□□□□ 0.47
CDCA3Q99618 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18■□□□□ 0.47
CDCA3Q99618 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18■□□□□ 0.47
CDCA3Q99618 MNT-208ENST00000575394 606 ntTSL 4 BASIC18■□□□□ 0.47
CDCA3Q99618 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 AL139327.4-201ENST00000612362 153 ntBASIC18■□□□□ 0.47
CDCA3Q99618 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18■□□□□ 0.47
CDCA3Q99618 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18■□□□□ 0.47
CDCA3Q99618 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18■□□□□ 0.47
CDCA3Q99618 FO538757.1-201ENST00000623083 1397 ntBASIC18■□□□□ 0.47
CDCA3Q99618 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18■□□□□ 0.47
CDCA3Q99618 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CDCA3Q99618 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDCA3Q99618 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA3Q99618 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDCA3Q99618 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA3Q99618 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDCA3Q99618 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms