Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDK5RAP1Q96SZ6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 GPR89P-201ENST00000407924 1495 ntBASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 AC073621.1-201ENST00000392730 636 ntBASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 LINC00982-205ENST00000420957 435 ntBASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 NEFHP1-201ENST00000412845 2629 ntBASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDK5RAP1Q96SZ6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 AP002414.3-201ENST00000589352 1468 ntBASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 PMS2P1-201ENST00000431037 1228 ntBASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 AC106730.1-201ENST00000566722 1090 ntBASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 AL353135.1-201ENST00000606729 504 ntBASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 AC117500.6-201ENST00000624871 588 ntBASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 GNAS-203ENST00000306120 1878 ntBASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.09■□□□□ 0.49
CDK5RAP1Q96SZ6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDK5RAP1Q96SZ6 AL355312.1-201ENST00000407115 2176 ntBASIC18.08■□□□□ 0.49
CDK5RAP1Q96SZ6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDK5RAP1Q96SZ6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.08■□□□□ 0.49
CDK5RAP1Q96SZ6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
CDK5RAP1Q96SZ6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CDK5RAP1Q96SZ6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDK5RAP1Q96SZ6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CDK5RAP1Q96SZ6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDK5RAP1Q96SZ6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CDK5RAP1Q96SZ6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.08■□□□□ 0.48
CDK5RAP1Q96SZ6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms