Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 REXO1L11P-201ENST00000620964 1927 ntBASIC16.54■□□□□ 0.24
COL21A1Q96P44 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.54■□□□□ 0.24
COL21A1Q96P44 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL21A1Q96P44 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 DDX43P3-201ENST00000441064 443 ntBASIC16.53■□□□□ 0.24
COL21A1Q96P44 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 AC112698.1-201ENST00000510299 916 ntBASIC16.53■□□□□ 0.24
COL21A1Q96P44 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.53■□□□□ 0.24
COL21A1Q96P44 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.53■□□□□ 0.24
COL21A1Q96P44 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL21A1Q96P44 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.52■□□□□ 0.24
COL21A1Q96P44 AL118508.1-201ENST00000613502 2345 ntBASIC16.52■□□□□ 0.24
COL21A1Q96P44 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.52■□□□□ 0.24
COL21A1Q96P44 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
COL21A1Q96P44 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.52■□□□□ 0.24
COL21A1Q96P44 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
COL21A1Q96P44 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
COL21A1Q96P44 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.52■□□□□ 0.24
COL21A1Q96P44 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
COL21A1Q96P44 AC011840.4-201ENST00000578471 627 ntBASIC16.52■□□□□ 0.24
COL21A1Q96P44 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.52■□□□□ 0.24
COL21A1Q96P44 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.52■□□□□ 0.24
COL21A1Q96P44 LINC01451-201ENST00000623792 534 ntBASIC16.52■□□□□ 0.24
COL21A1Q96P44 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL21A1Q96P44 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.52■□□□□ 0.23
COL21A1Q96P44 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COL21A1Q96P44 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
COL21A1Q96P44 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COL21A1Q96P44 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL21A1Q96P44 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms