Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 AC022898.2-201ENST00000616822 1312 ntBASIC14.21□□□□□ -0.13
ZNF48Q96MX3 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.21□□□□□ -0.13
ZNF48Q96MX3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 AC073621.1-201ENST00000392730 636 ntBASIC14.21□□□□□ -0.13
ZNF48Q96MX3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 UPF3AP3-201ENST00000420996 769 ntBASIC14.21□□□□□ -0.13
ZNF48Q96MX3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 AL691403.2-201ENST00000618460 490 ntBASIC14.21□□□□□ -0.13
ZNF48Q96MX3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF48Q96MX3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF48Q96MX3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF48Q96MX3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF48Q96MX3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF48Q96MX3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
ZNF48Q96MX3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF48Q96MX3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
ZNF48Q96MX3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.21□□□□□ -0.14
ZNF48Q96MX3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.21□□□□□ -0.14
ZNF48Q96MX3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF48Q96MX3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF48Q96MX3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.21□□□□□ -0.14
ZNF48Q96MX3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 YBX2P1-201ENST00000394192 760 ntBASIC14.2□□□□□ -0.14
ZNF48Q96MX3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 RPSAP43-201ENST00000402237 625 ntBASIC14.2□□□□□ -0.14
ZNF48Q96MX3 AC103564.2-201ENST00000432853 1299 ntBASIC14.2□□□□□ -0.14
ZNF48Q96MX3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 PRYP5-201ENST00000451909 266 ntBASIC14.2□□□□□ -0.14
ZNF48Q96MX3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 AC006557.2-201ENST00000592985 1240 ntBASIC14.2□□□□□ -0.14
ZNF48Q96MX3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 MST1L-201ENST00000442552 2185 ntBASIC14.2□□□□□ -0.14
ZNF48Q96MX3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF48Q96MX3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF48Q96MX3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms