Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLPTM1LQ96KA5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 LINC01311-201ENST00000565162 1445 ntBASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 AL353807.1-201ENST00000427475 662 ntBASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 MIR3180-4-201ENST00000582223 153 ntBASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 AF186192.3-201ENST00000583427 947 ntBASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 AC104771.1-201ENST00000603335 964 ntBASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLPTM1LQ96KA5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 CA15P1-201ENST00000481698 905 ntBASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 AC073195.1-201ENST00000607241 877 ntBASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 AC112497.1-201ENST00000624824 639 ntBASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 MST1L-201ENST00000442552 2185 ntBASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.79■□□□□ 0.28
CLPTM1LQ96KA5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLPTM1LQ96KA5 AC142086.2-201ENST00000569753 217 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms