Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AD000864.1-201ENST00000624076 2295 ntBASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 KLF4P1-201ENST00000412782 1185 ntBASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 AP000867.3-201ENST00000524675 377 ntBASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 AC022211.2-201ENST00000585075 2527 ntBASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDLIM5Q96HC4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 AC010331.1-201ENST00000611423 582 ntBASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PDLIM5Q96HC4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 AC124947.2-201ENST00000547118 1133 ntBASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 MIR5100-201ENST00000579544 119 ntBASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 PCDHA12-202ENST00000613593 2588 ntBASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms