Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 GCSHP2-201ENST00000560971 527 ntBASIC15.23■□□□□ 0.03
CPNE2Q96FN4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 AC145285.6-201ENST00000604632 637 ntBASIC15.23■□□□□ 0.03
CPNE2Q96FN4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CPNE2Q96FN4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CPNE2Q96FN4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 AL391807.1-203ENST00000604392 2365 ntBASIC15.21■□□□□ 0.03
CPNE2Q96FN4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 PP12613-201ENST00000424958 2230 ntBASIC15.21■□□□□ 0.03
CPNE2Q96FN4 CROCCP2-202ENST00000412962 2773 ntBASIC15.21■□□□□ 0.03
CPNE2Q96FN4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE2Q96FN4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CPNE2Q96FN4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CPNE2Q96FN4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CPNE2Q96FN4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.21■□□□□ 0.02
CPNE2Q96FN4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms