Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AL513480.1-201ENST00000451731 511 ntBASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 AC006116.8-202ENST00000587620 1550 ntBASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 AL590787.1-201ENST00000568856 1315 ntBASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNRNP40Q96DI7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 BX323043.1-201ENST00000641006 1765 ntBASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 MYCLP1-201ENST00000372451 1075 ntBASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 AC002558.1-201ENST00000488906 803 ntBASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 AC112191.1-201ENST00000523689 701 ntBASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 MIR4745-201ENST00000577608 62 ntBASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 AC138761.1-201ENST00000584393 385 ntBASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNRNP40Q96DI7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 ACTG1P4-201ENST00000425123 1122 ntBASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SNRNP40Q96DI7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms