Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CTHRC1Q96CG8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 BX005266.1-201ENST00000473402 457 ntBASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 SART3-203ENST00000546611 1184 ntBASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 AL121894.2-201ENST00000602977 491 ntBASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.15■□□□□ 0.18
CTHRC1Q96CG8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CTHRC1Q96CG8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CTHRC1Q96CG8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 LINC02012-201ENST00000608206 1725 ntBASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 SCARNA2-201ENST00000458748 420 ntBASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 AL691432.3-201ENST00000621860 400 ntBASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CTHRC1Q96CG8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 AC097637.2-201ENST00000624096 1997 ntBASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 TPM4P1-201ENST00000436100 807 ntBASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 EMBP1-201ENST00000458200 901 ntBASIC16.13■□□□□ 0.17
CTHRC1Q96CG8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms