Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.33■□□□□ 0.37
SH3KBP1Q96B97 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 SCARNA2-201ENST00000458748 420 ntBASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.33■□□□□ 0.36
SH3KBP1Q96B97 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 SLC25A6P5-201ENST00000435663 894 ntBASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 AL355877.3-201ENST00000622820 899 ntBASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SH3KBP1Q96B97 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 KRT18P55-202ENST00000578578 1546 ntBASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 ABCD1P5-201ENST00000445663 754 ntBASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 FAM197Y8-203ENST00000450145 560 ntBASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 AF186996.4-201ENST00000467186 377 ntBASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 AC100803.2-201ENST00000562459 1963 ntBASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH3KBP1Q96B97 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms