Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN23Q96B33 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN23Q96B33 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN23Q96B33 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 AL512638.1-201ENST00000457493 794 ntBASIC17.29■□□□□ 0.36
CLDN23Q96B33 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 AC097493.3-201ENST00000509725 367 ntBASIC17.29■□□□□ 0.36
CLDN23Q96B33 IGHV3-42-201ENST00000520410 361 ntBASIC17.29■□□□□ 0.36
CLDN23Q96B33 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN23Q96B33 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN23Q96B33 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.28■□□□□ 0.36
CLDN23Q96B33 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN23Q96B33 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN23Q96B33 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN23Q96B33 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 HMGA1P7-201ENST00000406908 502 ntBASIC17.28■□□□□ 0.36
CLDN23Q96B33 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.28■□□□□ 0.36
CLDN23Q96B33 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.28■□□□□ 0.36
CLDN23Q96B33 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN23Q96B33 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN23Q96B33 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLDN23Q96B33 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN23Q96B33 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN23Q96B33 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLDN23Q96B33 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN23Q96B33 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN23Q96B33 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN23Q96B33 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN23Q96B33 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN23Q96B33 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN23Q96B33 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN23Q96B33 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN23Q96B33 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN23Q96B33 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN23Q96B33 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN23Q96B33 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 AC069120.2-201ENST00000524091 540 ntBASIC17.27■□□□□ 0.36
CLDN23Q96B33 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN23Q96B33 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms