Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
ATL1Q8WXF7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ATL1Q8WXF7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATL1Q8WXF7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATL1Q8WXF7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ATL1Q8WXF7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 NSUN5P1-202ENST00000421140 1535 ntBASIC17.08■□□□□ 0.32
ATL1Q8WXF7 NSUN5P2-203ENST00000457352 1529 ntBASIC17.08■□□□□ 0.32
ATL1Q8WXF7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 POM121L3P-201ENST00000419331 1163 ntBASIC17.08■□□□□ 0.32
ATL1Q8WXF7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 AC012615.1-201ENST00000565797 1299 ntBASIC17.08■□□□□ 0.32
ATL1Q8WXF7 AC109462.3-201ENST00000573934 613 ntBASIC17.08■□□□□ 0.32
ATL1Q8WXF7 MIR3180-1-201ENST00000580374 94 ntBASIC17.08■□□□□ 0.32
ATL1Q8WXF7 MIR3180-3-201ENST00000584616 94 ntBASIC17.08■□□□□ 0.32
ATL1Q8WXF7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 AC019129.2-201ENST00000609837 1235 ntBASIC17.08■□□□□ 0.32
ATL1Q8WXF7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 LYSMD4-203ENST00000378904 2122 ntBASIC17.08■□□□□ 0.32
ATL1Q8WXF7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATL1Q8WXF7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 TP73-AS1-210ENST00000637775 1455 ntBASIC17.07■□□□□ 0.32
ATL1Q8WXF7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 IGHV3-47-201ENST00000425060 335 ntBASIC17.07■□□□□ 0.32
ATL1Q8WXF7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 AP000867.3-201ENST00000524675 377 ntBASIC17.07■□□□□ 0.32
ATL1Q8WXF7 AC074051.2-201ENST00000565115 352 ntBASIC17.07■□□□□ 0.32
ATL1Q8WXF7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 AC092329.2-201ENST00000598402 547 ntBASIC17.07■□□□□ 0.32
ATL1Q8WXF7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.07■□□□□ 0.32
ATL1Q8WXF7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 SIRPAP1-201ENST00000448467 1770 ntBASIC17.06■□□□□ 0.32
ATL1Q8WXF7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATL1Q8WXF7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms