Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.06■□□□□ 0.96
SNED1Q8TER0 AL645728.2-201ENST00000641974 660 ntBASIC21.06■□□□□ 0.96
SNED1Q8TER0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNED1Q8TER0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SNED1Q8TER0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNED1Q8TER0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SNED1Q8TER0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNED1Q8TER0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
SNED1Q8TER0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNED1Q8TER0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.06■□□□□ 0.96
SNED1Q8TER0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNED1Q8TER0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SNED1Q8TER0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNED1Q8TER0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 TFAMP1-201ENST00000412727 736 ntBASIC21.05■□□□□ 0.96
SNED1Q8TER0 AC005034.1-201ENST00000426657 489 ntBASIC21.05■□□□□ 0.96
SNED1Q8TER0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 LINC01225-203ENST00000563550 1244 ntBASIC21.05■□□□□ 0.96
SNED1Q8TER0 RARRES2P8-201ENST00000566335 367 ntBASIC21.05■□□□□ 0.96
SNED1Q8TER0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNED1Q8TER0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNED1Q8TER0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 REXO1L11P-201ENST00000620964 1927 ntBASIC21.05■□□□□ 0.96
SNED1Q8TER0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNED1Q8TER0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNED1Q8TER0 AC104581.1-202ENST00000635932 2618 ntBASIC21.05■□□□□ 0.96
SNED1Q8TER0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNED1Q8TER0 AC046185.3-201ENST00000623228 1824 ntBASIC21.05■□□□□ 0.96
SNED1Q8TER0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNED1Q8TER0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNED1Q8TER0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNED1Q8TER0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.05■□□□□ 0.96
SNED1Q8TER0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNED1Q8TER0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNED1Q8TER0 AL592309.1-201ENST00000443127 649 ntBASIC21.04■□□□□ 0.96
SNED1Q8TER0 BSG-214ENST00000614867 960 ntTSL 3 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNED1Q8TER0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNED1Q8TER0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNED1Q8TER0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNED1Q8TER0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNED1Q8TER0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNED1Q8TER0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNED1Q8TER0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNED1Q8TER0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNED1Q8TER0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 FAM207CP-201ENST00000443486 507 ntBASIC21.04■□□□□ 0.96
SNED1Q8TER0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SNED1Q8TER0 TUBB3P1-201ENST00000405796 1332 ntBASIC21.03■□□□□ 0.96
SNED1Q8TER0 AKAP8P1-201ENST00000434743 1349 ntBASIC21.03■□□□□ 0.96
SNED1Q8TER0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
SNED1Q8TER0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.03■□□□□ 0.96
SNED1Q8TER0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNED1Q8TER0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNED1Q8TER0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNED1Q8TER0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNED1Q8TER0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
SNED1Q8TER0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNED1Q8TER0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNED1Q8TER0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.03■□□□□ 0.96
SNED1Q8TER0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SNED1Q8TER0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.03■□□□□ 0.96
SNED1Q8TER0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.03■□□□□ 0.96
SNED1Q8TER0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.03■□□□□ 0.96
SNED1Q8TER0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SNED1Q8TER0 AC005237.2-201ENST00000434368 219 ntBASIC21.03■□□□□ 0.96
SNED1Q8TER0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.03■□□□□ 0.96
SNED1Q8TER0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.03■□□□□ 0.96
SNED1Q8TER0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.03■□□□□ 0.96
SNED1Q8TER0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNED1Q8TER0 AL020996.1-203ENST00000536896 2307 ntBASIC21.02■□□□□ 0.96
SNED1Q8TER0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNED1Q8TER0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNED1Q8TER0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms