Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 RPS15P9-201ENST00000494093 319 ntBASIC17.55■□□□□ 0.4
CHD5Q8TDI0 PGAM5P1-201ENST00000518923 814 ntBASIC17.55■□□□□ 0.4
CHD5Q8TDI0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHD5Q8TDI0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 RPL13AP23-201ENST00000480739 586 ntBASIC17.54■□□□□ 0.4
CHD5Q8TDI0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 DUX4L17-201ENST00000557360 1267 ntBASIC17.54■□□□□ 0.4
CHD5Q8TDI0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CHD5Q8TDI0 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 UNC93B6-202ENST00000528242 690 ntBASIC17.53■□□□□ 0.4
CHD5Q8TDI0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHD5Q8TDI0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHD5Q8TDI0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHD5Q8TDI0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHD5Q8TDI0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CHD5Q8TDI0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.52■□□□□ 0.4
CHD5Q8TDI0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHD5Q8TDI0 HCG4B-203ENST00000450128 991 ntBASIC17.52■□□□□ 0.4
CHD5Q8TDI0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.52■□□□□ 0.4
CHD5Q8TDI0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHD5Q8TDI0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.52■□□□□ 0.4
CHD5Q8TDI0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHD5Q8TDI0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CHD5Q8TDI0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHD5Q8TDI0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms