Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 AC009065.1-201ENST00000564055 1225 ntBASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 AC023824.1-201ENST00000562945 2975 ntBASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SMIM11BQ8TCY0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 MIR3180-5-201ENST00000583743 153 ntBASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
SMIM11BQ8TCY0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 LYSMD4-203ENST00000378904 2122 ntBASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.36□□□□□ -0.59
SMIM11BQ8TCY0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms