Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 RCN1P2-201ENST00000398357 915 ntBASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 AC122714.2-201ENST00000502787 707 ntBASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 MIR5100-201ENST00000579544 119 ntBASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 AL591684.3-201ENST00000605187 298 ntBASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 EMBP1-201ENST00000458200 901 ntBASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMARCC2Q8TAQ2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 AL049757.1-201ENST00000616842 1596 ntBASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMARCC2Q8TAQ2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMARCC2Q8TAQ2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms