Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC9.6□□□□□ -0.87
SPTSSBQ8NFR3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 AC004987.1-201ENST00000428627 508 ntBASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SPTSSBQ8NFR3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 SAPCD2P1-201ENST00000395413 1184 ntBASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 AC103834.1-201ENST00000520383 144 ntBASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SPTSSBQ8NFR3 AC138035.3-201ENST00000622706 2791 ntBASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms