Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.71■□□□□ 0.42
SYNPOQ8N3V7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SYNPOQ8N3V7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
SYNPOQ8N3V7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 AC011467.4-201ENST00000594891 528 ntBASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 AC097637.2-201ENST00000624096 1997 ntBASIC17.7■□□□□ 0.42
SYNPOQ8N3V7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 NOC2LP2-201ENST00000407594 1944 ntBASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 AC018470.1-201ENST00000624790 3129 ntBASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 MYCLP1-201ENST00000372451 1075 ntBASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 AC009336.1-201ENST00000608941 1553 ntBASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SYNPOQ8N3V7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 ABALON-201ENST00000629058 1903 ntBASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 TSEN15P1-201ENST00000423257 515 ntBASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 FAM58CP-201ENST00000435741 640 ntBASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 AC004835.2-201ENST00000603762 682 ntBASIC17.68■□□□□ 0.42
SYNPOQ8N3V7 AC027612.4-201ENST00000605371 583 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms