Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 KLF2P3-201ENST00000451977 1087 ntBASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 MIR4515-201ENST00000584082 81 ntBASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.26■□□□□ 0.19
COL27A1Q8IZC6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 AL512356.2-201ENST00000546955 174 ntBASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 MIR3909-201ENST00000579518 119 ntBASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 RN7SL204P-201ENST00000582831 262 ntBASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 AC055876.3-201ENST00000431496 288 ntBASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 AC138649.4-201ENST00000612222 287 ntBASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL27A1Q8IZC6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 TREML5P-201ENST00000421694 576 ntBASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 CNN2P2-201ENST00000443536 909 ntBASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 CNN2P3-201ENST00000450201 906 ntBASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 FAM86C2P-203ENST00000528684 1004 ntBASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 AL136317.3-201ENST00000618497 906 ntBASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 SLC22A20-204ENST00000530038 1673 ntBASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL27A1Q8IZC6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 AC008677.1-201ENST00000519230 1561 ntBASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 SLC25A39P2-201ENST00000537614 270 ntBASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
COL27A1Q8IZC6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms