Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RP1L1Q8IWN7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 OR7E47P-204ENST00000575924 449 ntBASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 AL353135.1-201ENST00000606729 504 ntBASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 AC005034.1-201ENST00000426657 489 ntBASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.79■□□□□ 0.12
RP1L1Q8IWN7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 AC104581.1-202ENST00000635932 2618 ntBASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 AC025678.2-201ENST00000562061 970 ntBASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RP1L1Q8IWN7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RP1L1Q8IWN7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.77■□□□□ 0.12
RP1L1Q8IWN7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RP1L1Q8IWN7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
RP1L1Q8IWN7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.77■□□□□ 0.12
RP1L1Q8IWN7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.77■□□□□ 0.12
RP1L1Q8IWN7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.77■□□□□ 0.12
RP1L1Q8IWN7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.77■□□□□ 0.12
RP1L1Q8IWN7 AC109322.1-201ENST00000524499 1264 ntBASIC15.77■□□□□ 0.12
RP1L1Q8IWN7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.77■□□□□ 0.12
RP1L1Q8IWN7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RP1L1Q8IWN7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms