Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 FAM8A6P-201ENST00000407496 1135 ntBASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 AC009947.2-201ENST00000444014 672 ntBASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 AC092647.4-201ENST00000457211 535 ntBASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 AL031432.5-201ENST00000641059 760 ntBASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.48■□□□□ 0.39
CRLF3Q8IUI8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 AC016396.2-201ENST00000562575 1417 ntBASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 AL441883.1-201ENST00000566170 1045 ntBASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 LINC00167-201ENST00000530583 1419 ntBASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
CRLF3Q8IUI8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 DDX43P3-201ENST00000441064 443 ntBASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.46■□□□□ 0.39
CRLF3Q8IUI8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms