Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC28Q86X40 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC28Q86X40 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC28Q86X40 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC28Q86X40 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 AL359075.1-203ENST00000462729 1002 ntBASIC15.59■□□□□ 0.09
LRRC28Q86X40 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC28Q86X40 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC28Q86X40 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC28Q86X40 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC28Q86X40 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC28Q86X40 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC28Q86X40 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC28Q86X40 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LRRC28Q86X40 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LRRC28Q86X40 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LRRC28Q86X40 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRC28Q86X40 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.58■□□□□ 0.09
LRRC28Q86X40 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
LRRC28Q86X40 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRC28Q86X40 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRC28Q86X40 FLJ38576-201ENST00000623820 2459 ntBASIC15.58■□□□□ 0.09
LRRC28Q86X40 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
LRRC28Q86X40 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRC28Q86X40 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LRRC28Q86X40 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC28Q86X40 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC28Q86X40 AL031133.1-201ENST00000406807 723 ntBASIC15.58■□□□□ 0.08
LRRC28Q86X40 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC28Q86X40 KRT18P23-201ENST00000435622 1283 ntBASIC15.58■□□□□ 0.08
LRRC28Q86X40 SEC1P-202ENST00000473944 940 ntBASIC15.58■□□□□ 0.08
LRRC28Q86X40 DUTP2-201ENST00000519164 463 ntBASIC15.58■□□□□ 0.08
LRRC28Q86X40 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC28Q86X40 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC28Q86X40 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC28Q86X40 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC28Q86X40 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC28Q86X40 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LRRC28Q86X40 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.58■□□□□ 0.08
LRRC28Q86X40 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRC28Q86X40 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRC28Q86X40 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LRRC28Q86X40 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LRRC28Q86X40 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 KRT18P38-201ENST00000449496 1282 ntBASIC15.57■□□□□ 0.08
LRRC28Q86X40 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.57■□□□□ 0.08
LRRC28Q86X40 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.57■□□□□ 0.08
LRRC28Q86X40 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LRRC28Q86X40 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LRRC28Q86X40 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRC28Q86X40 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.57■□□□□ 0.08
LRRC28Q86X40 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 LINC01126-201ENST00000623515 1646 ntBASIC15.57■□□□□ 0.08
LRRC28Q86X40 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRRC28Q86X40 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms