Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 YBX1P2-201ENST00000489612 999 ntBASIC21.82■■□□□ 1.08
SKAP1Q86WV1 AL512604.3-201ENST00000569583 964 ntBASIC21.82■■□□□ 1.08
SKAP1Q86WV1 AC140113.3-201ENST00000605663 199 ntBASIC21.82■■□□□ 1.08
SKAP1Q86WV1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.82■■□□□ 1.08
SKAP1Q86WV1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC21.82■■□□□ 1.08
SKAP1Q86WV1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SKAP1Q86WV1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SKAP1Q86WV1 LINC02012-201ENST00000608206 1725 ntBASIC21.82■■□□□ 1.08
SKAP1Q86WV1 AL353692.3-201ENST00000407031 1396 ntBASIC21.82■■□□□ 1.08
SKAP1Q86WV1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SKAP1Q86WV1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SKAP1Q86WV1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SKAP1Q86WV1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SKAP1Q86WV1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SKAP1Q86WV1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SKAP1Q86WV1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SKAP1Q86WV1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 AC034232.1-201ENST00000506026 1064 ntBASIC21.81■■□□□ 1.08
SKAP1Q86WV1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 AC008687.5-201ENST00000593746 558 ntBASIC21.81■■□□□ 1.08
SKAP1Q86WV1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 HYMAI.1-201ENST00000620949 238 ntBASIC21.81■■□□□ 1.08
SKAP1Q86WV1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SKAP1Q86WV1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 COX11P1-201ENST00000489116 835 ntBASIC21.8■■□□□ 1.08
SKAP1Q86WV1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 AC093525.9-201ENST00000624961 1746 ntBASIC21.8■■□□□ 1.08
SKAP1Q86WV1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC21.8■■□□□ 1.08
SKAP1Q86WV1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.79■■□□□ 1.08
SKAP1Q86WV1 KRT18P57-201ENST00000443599 1254 ntBASIC21.79■■□□□ 1.08
SKAP1Q86WV1 AL359075.1-203ENST00000462729 1002 ntBASIC21.79■■□□□ 1.08
SKAP1Q86WV1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKAP1Q86WV1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms