Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PACS2Q86VP3 AC011298.2-201ENST00000617989 482 ntBASIC17.62■□□□□ 0.41
PACS2Q86VP3 AC130371.2-201ENST00000619443 611 ntBASIC17.62■□□□□ 0.41
PACS2Q86VP3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PACS2Q86VP3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PACS2Q86VP3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PACS2Q86VP3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PACS2Q86VP3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PACS2Q86VP3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PACS2Q86VP3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.62■□□□□ 0.41
PACS2Q86VP3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PACS2Q86VP3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PACS2Q86VP3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
PACS2Q86VP3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 CROCCP1-201ENST00000426910 5675 ntBASIC17.61■□□□□ 0.41
PACS2Q86VP3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 MMP23A-201ENST00000234610 1017 ntBASIC17.61■□□□□ 0.41
PACS2Q86VP3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 TSPY15P-201ENST00000457163 923 ntBASIC17.61■□□□□ 0.41
PACS2Q86VP3 AC011506.1-201ENST00000474329 610 ntBASIC17.61■□□□□ 0.41
PACS2Q86VP3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PACS2Q86VP3 AC092171.3-201ENST00000610122 2651 ntBASIC17.61■□□□□ 0.41
PACS2Q86VP3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PACS2Q86VP3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 FAM207BP-201ENST00000447172 505 ntBASIC17.6■□□□□ 0.41
PACS2Q86VP3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 Z85996.1-201ENST00000494644 937 ntBASIC17.6■□□□□ 0.41
PACS2Q86VP3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 AC132872.1-201ENST00000566986 1195 ntBASIC17.6■□□□□ 0.41
PACS2Q86VP3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 AP000525.1-201ENST00000608286 694 ntBASIC17.6■□□□□ 0.41
PACS2Q86VP3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PACS2Q86VP3 AC005915.1-201ENST00000624912 2018 ntBASIC17.6■□□□□ 0.41
PACS2Q86VP3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 AL009178.2-201ENST00000597278 2719 ntBASIC17.6■□□□□ 0.41
PACS2Q86VP3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PACS2Q86VP3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PACS2Q86VP3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.59■□□□□ 0.41
PACS2Q86VP3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms