Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 AC091304.2-201ENST00000564639 760 ntBASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 AC111152.3-201ENST00000569699 673 ntBASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 AC012313.10-201ENST00000623509 926 ntBASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHMP1BQ7LBR1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 MTCL1P1-201ENST00000446207 792 ntBASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 AC068472.1-201ENST00000474589 881 ntBASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 FOSL1P1-201ENST00000511041 816 ntBASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 AC138894.3-201ENST00000603787 634 ntBASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CHMP1BQ7LBR1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CHMP1BQ7LBR1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHMP1BQ7LBR1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms